STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN27683.1Hypothetical protein. (114 aa)    
Predicted Functional Partners:
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
 
 
  0.948
guaA
guaA protein; Catalyzes the synthesis of GMP from XMP.
    
  0.919
KRN29255.1
Beta-glucosides PTS, EIIABC.
    
 
 0.797
KRN29045.1
Hypothetical protein.
    
 
 0.797
KRN28156.1
Beta-glucosides PTS, EIIBCA.
    
 
 0.797
KRN28784.1
Hypothetical protein.
    
 
 0.790
KRN28790.1
Pts, eiia.
    
 
 0.790
KRN28921.1
N-acetylglucosamine and glucose PTS, EIICBA.
    
 
 0.790
KRN28126.1
Hypothetical protein.
    
 
 0.790
KRN27691.1
Hypothetical protein.
 
     0.730
Your Current Organism:
Lactobacillus selangorensis
NCBI taxonomy Id: 81857
Other names: ATCC BAA-66, CCUG 43347, CIP 106482, DSM 13344, L. selangorensis, LMG 17710, LMG:17710, Lactobacillus selangorensis (Leisner et al. 2000) Haakensen et al. 2011, Lactobacillus sp. LMG17710, Paralactobacillus selangorensis, Paralactobacillus selangorensis Leisner et al. 2000, bacterium LMG17714
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.