STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN27739.1Hypothetical protein. (162 aa)    
Predicted Functional Partners:
KRN27740.1
Terminase large subunit.
 
    0.930
KRN27741.1
Phage portal protein, HK97 family.
 
  
 0.919
KRN27743.1
Phage major head protein.
 
   
 0.863
KRN27742.1
Hypothetical protein; Belongs to the peptidase S14 family.
 
    0.847
KRN27745.1
Hypothetical protein.
 
     0.835
KRN27746.1
Hypothetical protein.
 
     0.826
KRN27749.1
Hypothetical protein.
 
     0.793
KRN27750.1
Hypothetical protein.
 
     0.792
KRN27751.1
Hypothetical protein.
 
     0.786
KRN27357.1
Phage-related antirepressor.
 
     0.609
Your Current Organism:
Lactobacillus selangorensis
NCBI taxonomy Id: 81857
Other names: ATCC BAA-66, CCUG 43347, CIP 106482, DSM 13344, L. selangorensis, LMG 17710, LMG:17710, Lactobacillus selangorensis (Leisner et al. 2000) Haakensen et al. 2011, Lactobacillus sp. LMG17710, Paralactobacillus selangorensis, Paralactobacillus selangorensis Leisner et al. 2000, bacterium LMG17714
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.