Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ORA63877.1Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)    
Predicted Functional Partners:
ORA63815.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.967
ORA63816.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.902
ORA63371.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.821
ORA69125.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.775
ORA63813.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.695
ORA63814.1
Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.684
ORA63812.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.677
ORA63701.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.640
BST23_20790
Retinol dehydrogenase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.594
ORA63817.1
DNA starvation/stationary phase protection protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.
  
    0.586
Your Current Organism:
Mycolicibacterium elephantis
NCBI taxonomy Id: 81858
Other names: CIP 106831, DSM 44368, JCM 12406, M. elephantis, Mycobacterium elephantis, Mycobacterium elephantis Shojaei et al. 2000, Mycobacterium sp. 1477680.9, Mycobacterium sp. 852002-10318_SCH4845932, Mycobacterium sp. 852014-51730_SCH5271717, Mycolicibacterium elephantis (Shojaei et al. 2000) Gupta et al. 2018, strain 484
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