Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ORA59158.1 | ORA59159.1 | BST23_24670 | BST23_24675 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.702 |
ORA59158.1 | ORA59160.1 | BST23_24670 | BST23_24680 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.464 |
ORA59159.1 | ORA59158.1 | BST23_24675 | BST23_24670 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.702 |
ORA59159.1 | ORA59160.1 | BST23_24675 | BST23_24680 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.545 |
ORA59159.1 | ORA59180.1 | BST23_24675 | BST23_24685 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 9-cis-epoxycarotenoid dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.407 |
ORA59160.1 | ORA59158.1 | BST23_24680 | BST23_24670 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.464 |
ORA59160.1 | ORA59159.1 | BST23_24680 | BST23_24675 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.545 |
ORA59160.1 | ORA59180.1 | BST23_24680 | BST23_24685 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 9-cis-epoxycarotenoid dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.656 |
ORA59160.1 | ORA64839.1 | BST23_24680 | BST23_16260 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.483 |
ORA59160.1 | ORA65419.1 | BST23_24680 | BST23_13645 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.417 |
ORA59160.1 | ORA66915.1 | BST23_24680 | BST23_08275 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.681 |
ORA59180.1 | ORA59159.1 | BST23_24685 | BST23_24675 | 9-cis-epoxycarotenoid dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.407 |
ORA59180.1 | ORA59160.1 | BST23_24685 | BST23_24680 | 9-cis-epoxycarotenoid dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.656 |
ORA64839.1 | ORA59160.1 | BST23_16260 | BST23_24680 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.483 |
ORA65419.1 | ORA59160.1 | BST23_13645 | BST23_24680 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.417 |
ORA66915.1 | ORA59160.1 | BST23_08275 | BST23_24680 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.681 |