Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ORA58960.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)    
Predicted Functional Partners:
ORA58961.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.831
ORA58959.1
PucR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.758
ORA66684.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.615
ORA61917.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.589
ORA65322.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.585
ORA62352.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.451
ORA61079.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.449
ORA66685.1
Cation-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.444
ORA65109.1
Transcriptional regulator ArgP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
   
  
 0.433
ORA58958.1
Transcription elongation factor GreAB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.425
Your Current Organism:
Mycolicibacterium elephantis
NCBI taxonomy Id: 81858
Other names: CIP 106831, DSM 44368, JCM 12406, M. elephantis, Mycobacterium elephantis, Mycobacterium elephantis Shojaei et al. 2000, Mycobacterium sp. 1477680.9, Mycobacterium sp. 852002-10318_SCH4845932, Mycobacterium sp. 852014-51730_SCH5271717, Mycolicibacterium elephantis (Shojaei et al. 2000) Gupta et al. 2018, strain 484
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