STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA58948.1Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. (179 aa)    
Predicted Functional Partners:
ORA67615.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.752
ORA67175.1
3-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.671
ORA58947.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.601
ORA67314.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.599
ORA58949.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.509
ORA66190.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.482
ORA68833.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.481
ORA62855.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.477
ORA58953.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.431
Your Current Organism:
Mycolicibacterium elephantis
NCBI taxonomy Id: 81858
Other names: CIP 106831, DSM 44368, JCM 12406, M. elephantis, Mycobacterium elephantis, Mycobacterium elephantis Shojaei et al. 2000, Mycobacterium sp. 1477680.9, Mycobacterium sp. 852002-10318_SCH4845932, Mycobacterium sp. 852014-51730_SCH5271717, Mycolicibacterium elephantis (Shojaei et al. 2000) Gupta et al. 2018, strain 484
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