STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCAP00010006845Uncharacterized protein. (1018 aa)    
Predicted Functional Partners:
ENSLCAP00010032062
Uncharacterized protein.
 
 0.933
ENSLCAP00010006811
Protein kinase domain-containing protein.
 
 
 0.912
ENSLCAP00010007184
Uncharacterized protein.
 
      0.899
ENSLCAP00010007120
Uncharacterized protein.
 
      0.896
ENSLCAP00010006796
Uncharacterized protein.
 
      0.885
ENSLCAP00010007248
Uncharacterized protein.
 
      0.885
ENSLCAP00010021753
annotation not available
 
      0.885
ENSLCAP00010031554
Uncharacterized protein.
 
      0.884
ENSLCAP00010020318
Myosin light chain kinase family, member 4a; Belongs to the protein kinase superfamily.
 
 
 
 0.876
ENSLCAP00010031725
Uncharacterized protein.
 
      0.875
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.