STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cenpnUncharacterized protein. (346 aa)    
Predicted Functional Partners:
Cenpq
Uncharacterized protein.
   
 0.991
cenpk
Uncharacterized protein.
   
 0.990
cenpm
Uncharacterized protein.
   
 0.989
cenpp
Uncharacterized protein.
   
 0.987
cenpi
Uncharacterized protein.
   
 0.987
cenpw
Uncharacterized protein.
   
 0.983
ENSLCAP00010057290
Centromere protein X.
    
 0.937
cenpu
Uncharacterized protein.
   
 0.906
ENSLCAP00010024363
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
 
 0.902
ENSLCAP00010012158
Uncharacterized protein.
   
 0.875
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.