STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108884239Erf4 domain-containing protein. (200 aa)    
Predicted Functional Partners:
zdhhc8
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 0.635
ENSLCAP00010034706
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 0.611
ENSLCAP00010018865
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 0.550
zdhhc5
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 0.550
ENSLCAP00010054663
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 0.550
ENSLCAP00010013674
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 0.539
ZDHHC14
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 0.481
LOC108900297
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 0.481
Zdhhc18
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 0.481
ENSLCAP00010013631
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 0.481
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
Server load: low (30%) [HD]