STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dis3lDIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (1053 aa)    
Predicted Functional Partners:
exosc9
Uncharacterized protein.
   
 0.986
exosc2
Uncharacterized protein.
   
 0.984
exosc8
Uncharacterized protein.
   
 0.982
ENSLCAP00010009211
Exosome component 10.
   
 0.980
exosc4
Uncharacterized protein.
   
 0.980
exosc5
Uncharacterized protein.
   
 0.976
Exosc7
Exosome component 7.
   
 0.975
ENSLCAP00010025716
Exosome component 6.
   
 0.973
EXOSC3
KH_dom_type_1 domain-containing protein.
   
 0.950
ENSLCAP00010021743
annotation not available
   
 0.950
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.