STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrps27Uncharacterized protein. (424 aa)    
Predicted Functional Partners:
mrps15
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
 0.996
Dap3
Death associated protein 3.
   
 0.995
Mrps5
Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 0.992
mrps25
L51_S25_CI-B8 domain-containing protein.
   
 0.991
mrps30
Uncharacterized protein.
   
 0.991
ptcd3
PPR_long domain-containing protein.
   
 0.991
ENSLCAP00010012427
Mitochondrial ribosomal protein S10.
    
 0.990
mrps22
Uncharacterized protein.
   
 0.989
mrps21
Uncharacterized protein.
    
 0.989
mrps9
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 0.988
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.