STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108875726G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (388 aa)    
Predicted Functional Partners:
LOC108874411
Somatostatin domain-containing protein.
   
 0.889
LOC108876370
Somatostatin domain-containing protein.
     
 0.756
ENSLCAP00010019184
Somatostatin domain-containing protein.
     
  0.650
LOC108874412
Somatostatin domain-containing protein.
     
  0.650
smo
Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.514
bbs2
Bardet-Biedl syndrome 2 protein homolog.
     
 0.501
bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
     
 0.488
bbs1
BBS1 domain-containing protein.
     
 0.483
bbs4
TPR_REGION domain-containing protein.
     
 0.481
ENSLCAP00010009262
Bardet-Biedl syndrome 9.
     
 0.457
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.