STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCAP00010012314Steroid 5 alpha-reductase 3. (322 aa)    
Predicted Functional Partners:
dolk
Uncharacterized protein.
     
 0.713
srd5a1
3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)).
      
 0.708
srd5a2
3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)).
      
 0.670
nus1
Uncharacterized protein.
      
 0.659
dhdds
Alkyl transferase; Belongs to the UPP synthase family.
      
 0.657
Alg6
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
      
 0.653
dolpp1
acidPPc domain-containing protein.
      
 0.630
dpagt1
Uncharacterized protein.
      
 0.614
LOC108873084
Uncharacterized protein.
      
 0.607
ccdc25
NFACT-R_1 domain-containing protein.
      
 0.597
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.