STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCAP00010013290Oral-facial-digital syndrome 1. (703 aa)    
Predicted Functional Partners:
plk2
Uncharacterized protein.
   
 0.659
plk3
Serine/threonine-protein kinase PLK.
   
 0.659
PLK1
Serine/threonine-protein kinase PLK.
   
 0.659
fopnl
LisH domain-containing protein.
   
 
 0.653
ENSLCAP00010003447
Si:dkey-243i1.1.
    
 
 0.649
arl13b
Uncharacterized protein.
   
 
 0.630
C2cd3
C2 calcium-dependent domain containing 3.
    
 0.624
ENSLCAP00010006129
Centrosomal protein 290.
    
 
 0.622
C8orf37
Uncharacterized protein.
      
 0.598
ENSLCAP00010032620
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.592
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.