STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108873217MFS domain-containing protein. (612 aa)    
Predicted Functional Partners:
ints9
Beta-Casp domain-containing protein.
    
 0.505
Ints1
Integrator complex subunit 1.
    
 0.504
ints11
Uncharacterized protein.
    
 0.488
ENSLCAP00010049867
Integrator complex subunit 4.
    
 0.483
ints7
Uncharacterized protein.
    
 0.475
Ints3
Integrator complex subunit 3.
    
 0.474
Asun
Integrator complex subunit 13.
    
 0.471
ints10
Uncharacterized protein.
    
 0.448
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.