STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCAP00010014849Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (271 aa)    
Predicted Functional Partners:
rpl23
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
 0.999
mrpl13
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
 
 0.998
mrpl2
Ribosomal_L2_C domain-containing protein.
  
 0.998
mrps9
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.998
mrpl16
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
  
 0.998
Mrpl22
Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
  
 0.998
Mrps6
Mitochondrial ribosomal protein S6.
  
 0.998
mrpl19
Uncharacterized protein.
  
 
 0.998
mrpl20
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.998
mrpl11
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
  
 0.998
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.