STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108881636Uncharacterized protein; Belongs to the GST superfamily. (242 aa)    
Predicted Functional Partners:
ENSLCAP00010009483
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.948
ENSLCAP00010057633
Glutamyl-prolyl-tRNA synthetase.
   
 0.948
gsr
Uncharacterized protein.
   
 
 0.923
LOC108897725
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 
 0.910
Ephx1
Epoxide hydrolase; Biotransformation enzyme that catalyzes the hydrolysis of arene and aliphatic epoxides to less reactive and more water soluble dihydrodiols by the trans addition of water. Belongs to the peptidase S33 family.
   
 
 0.909
ENSLCAP00010040525
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 
 0.909
gsto1
Uncharacterized protein.
   
 0.906
LOC108886282
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 
 0.906
LOC108876447
Uncharacterized protein; Belongs to the GST superfamily.
    
 0.903
txndc12
Thioredoxin domain-containing protein.
    
  0.902
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
Server load: low (24%) [HD]