STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc9a5Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (965 aa)    
Predicted Functional Partners:
chp1
Uncharacterized protein.
   
 0.850
ENSLCAP00010050369
Calcineurin-like EF-hand protein 2.
   
 0.629
ENSLCAP00010025981
Protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b.
   
 0.532
ppp3r1
Uncharacterized protein.
   
 0.532
LOC108892989
Uncharacterized protein.
   
 0.475
LOC108879814
EF-hand domain-containing protein.
   
 0.475
tesc
Uncharacterized protein.
   
 0.475
Cib1
Calcium and integrin binding 1 (calmyrin).
   
 0.449
LOC108875252
Link domain-containing protein.
     
 0.448
LOC108901695
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.415
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.