STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCAP00010017147Uncharacterized protein. (149 aa)    
Predicted Functional Partners:
fancm
Uncharacterized protein.
    
 0.871
lin52
Uncharacterized protein.
    
 0.554
lin54
CRC domain-containing protein.
   
 0.540
lin9
DIRP domain-containing protein.
    
 0.503
ENSLCAP00010022495
E2F transcription factor 4.
    
 0.436
LOC108891726
Uncharacterized protein.
  
   
 0.425
ENSLCAP00010017650
Retinoblastoma binding protein 4, like.
    
  0.416
ENSLCAP00010020695
Retinoblastoma binding protein 4.
    
  0.416
LOC108900385
WD_REPEATS_REGION domain-containing protein.
    
  0.416
dut
dUTPase domain-containing protein.
    
 0.413
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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