STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrps18bUncharacterized protein. (243 aa)    
Predicted Functional Partners:
mrps22
Uncharacterized protein.
   
 0.993
mrps33
Uncharacterized protein.
   
 0.984
Dap3
Death associated protein 3.
   
 0.984
mrps31
Uncharacterized protein.
   
 0.983
mrps27
Uncharacterized protein.
   
 0.982
mrps18c
Uncharacterized protein.
   
0.981
mrps18a
Uncharacterized protein.
   
 0.977
mrps7
Ribosomal_S7 domain-containing protein.
   
 0.975
Mrps28
Mitochondrial ribosomal protein S28.
   
 0.973
mrps9
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 0.971
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.