Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bcl6b | Cxcr5 | ENSLCAP00010019195 | ENSLCAP00010011359 | B cell CLL/lymphoma 6B. | Chemokine (C-X-C motif) receptor 5; Belongs to the G-protein coupled receptor 1 family. | 0.420 |
Bcl6b | ENSLCAP00010026830 | ENSLCAP00010019195 | ENSLCAP00010026830 | B cell CLL/lymphoma 6B. | Nebulin. | 0.590 |
Bcl6b | ENSLCAP00010034825 | ENSLCAP00010019195 | ENSLCAP00010034825 | B cell CLL/lymphoma 6B. | BCL6 corepressor-like 1. | 0.616 |
Bcl6b | ENSLCAP00010050805 | ENSLCAP00010019195 | ENSLCAP00010050805 | B cell CLL/lymphoma 6B. | Nuclear receptor corepressor 2. | 0.675 |
Bcl6b | ENSLCAP00010053800 | ENSLCAP00010019195 | ENSLCAP00010053800 | B cell CLL/lymphoma 6B. | ANK_REP_REGION domain-containing protein. | 0.616 |
Bcl6b | LOC108876571 | ENSLCAP00010019195 | ENSLCAP00010031387 | B cell CLL/lymphoma 6B. | Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family. | 0.424 |
Bcl6b | LOC108879980 | ENSLCAP00010019195 | ENSLCAP00010016052 | B cell CLL/lymphoma 6B. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.501 |
Bcl6b | LOC108896897 | ENSLCAP00010019195 | ENSLCAP00010026784 | B cell CLL/lymphoma 6B. | Uncharacterized protein. | 0.422 |
Bcl6b | bcor | ENSLCAP00010019195 | ENSLCAP00010021849 | B cell CLL/lymphoma 6B. | ANK_REP_REGION domain-containing protein. | 0.616 |
Bcl6b | ncor1 | ENSLCAP00010019195 | ENSLCAP00010041303 | B cell CLL/lymphoma 6B. | Uncharacterized protein. | 0.675 |
Cxcr5 | Bcl6b | ENSLCAP00010011359 | ENSLCAP00010019195 | Chemokine (C-X-C motif) receptor 5; Belongs to the G-protein coupled receptor 1 family. | B cell CLL/lymphoma 6B. | 0.420 |
ENSLCAP00010026830 | Bcl6b | ENSLCAP00010026830 | ENSLCAP00010019195 | Nebulin. | B cell CLL/lymphoma 6B. | 0.590 |
ENSLCAP00010034825 | Bcl6b | ENSLCAP00010034825 | ENSLCAP00010019195 | BCL6 corepressor-like 1. | B cell CLL/lymphoma 6B. | 0.616 |
ENSLCAP00010050805 | Bcl6b | ENSLCAP00010050805 | ENSLCAP00010019195 | Nuclear receptor corepressor 2. | B cell CLL/lymphoma 6B. | 0.675 |
ENSLCAP00010050805 | LOC108896897 | ENSLCAP00010050805 | ENSLCAP00010026784 | Nuclear receptor corepressor 2. | Uncharacterized protein. | 0.450 |
ENSLCAP00010053800 | Bcl6b | ENSLCAP00010053800 | ENSLCAP00010019195 | ANK_REP_REGION domain-containing protein. | B cell CLL/lymphoma 6B. | 0.616 |
LOC108876571 | Bcl6b | ENSLCAP00010031387 | ENSLCAP00010019195 | Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family. | B cell CLL/lymphoma 6B. | 0.424 |
LOC108879980 | Bcl6b | ENSLCAP00010016052 | ENSLCAP00010019195 | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | B cell CLL/lymphoma 6B. | 0.501 |
LOC108896897 | Bcl6b | ENSLCAP00010026784 | ENSLCAP00010019195 | Uncharacterized protein. | B cell CLL/lymphoma 6B. | 0.422 |
LOC108896897 | ENSLCAP00010050805 | ENSLCAP00010026784 | ENSLCAP00010050805 | Uncharacterized protein. | Nuclear receptor corepressor 2. | 0.450 |
page 1 of 2