LOC108898336 protein (Lates calcarifer) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

LOC108898336

Uncharacterized protein. (83 aa)

Predicted Functional Partners:

ENSLCAP00010021885

0.859

LOC108899412

0.859

Apob

0.508

LOC108881263

0.508

ENSLCAP00010041484

0.508

ENSLCAP00010045839

0.508

ENSLCAP00010045879

0.508

LOC108881282

0.508

LOC108898295

0.476

ENSLCAP00010021877

0.476

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Apob	ENSLCAP00010021877	ENSLCAP00010000082	ENSLCAP00010021877	Apolipoprotein Ba.	Uncharacterized protein.	0.855
Apob	ENSLCAP00010021885	ENSLCAP00010000082	ENSLCAP00010021885	Apolipoprotein Ba.	Apolipoprotein Eb.	0.746
Apob	ENSLCAP00010045839	ENSLCAP00010000082	ENSLCAP00010045839	Apolipoprotein Ba.	Vitellogenin domain-containing protein.	0.939
Apob	LOC108898295	ENSLCAP00010000082	ENSLCAP00010021870	Apolipoprotein Ba.	Uncharacterized protein.	0.855
Apob	LOC108898336	ENSLCAP00010000082	ENSLCAP00010021890	Apolipoprotein Ba.	Uncharacterized protein.	0.508
Apob	LOC108899412	ENSLCAP00010000082	ENSLCAP00010037018	Apolipoprotein Ba.	Uncharacterized protein.	0.910
ENSLCAP00010021877	Apob	ENSLCAP00010021877	ENSLCAP00010000082	Uncharacterized protein.	Apolipoprotein Ba.	0.855
ENSLCAP00010021877	ENSLCAP00010021885	ENSLCAP00010021877	ENSLCAP00010021885	Uncharacterized protein.	Apolipoprotein Eb.	0.719
ENSLCAP00010021877	ENSLCAP00010041484	ENSLCAP00010021877	ENSLCAP00010041484	Uncharacterized protein.	Uncharacterized protein.	0.737
ENSLCAP00010021877	ENSLCAP00010045839	ENSLCAP00010021877	ENSLCAP00010045839	Uncharacterized protein.	Vitellogenin domain-containing protein.	0.855
ENSLCAP00010021877	ENSLCAP00010045879	ENSLCAP00010021877	ENSLCAP00010045879	Uncharacterized protein.	Apolipoprotein Bb, tandem duplicate 2.	0.855
ENSLCAP00010021877	LOC108881263	ENSLCAP00010021877	ENSLCAP00010028772	Uncharacterized protein.	Vitellogenin domain-containing protein.	0.737
ENSLCAP00010021877	LOC108881282	ENSLCAP00010021877	ENSLCAP00010046952	Uncharacterized protein.	Uncharacterized protein.	0.737
ENSLCAP00010021877	LOC108898336	ENSLCAP00010021877	ENSLCAP00010021890	Uncharacterized protein.	Uncharacterized protein.	0.476
ENSLCAP00010021877	LOC108899412	ENSLCAP00010021877	ENSLCAP00010037018	Uncharacterized protein.	Uncharacterized protein.	0.843
ENSLCAP00010021885	Apob	ENSLCAP00010021885	ENSLCAP00010000082	Apolipoprotein Eb.	Apolipoprotein Ba.	0.746
ENSLCAP00010021885	ENSLCAP00010021877	ENSLCAP00010021885	ENSLCAP00010021877	Apolipoprotein Eb.	Uncharacterized protein.	0.719
ENSLCAP00010021885	ENSLCAP00010041484	ENSLCAP00010021885	ENSLCAP00010041484	Apolipoprotein Eb.	Uncharacterized protein.	0.612
ENSLCAP00010021885	ENSLCAP00010045839	ENSLCAP00010021885	ENSLCAP00010045839	Apolipoprotein Eb.	Vitellogenin domain-containing protein.	0.746
ENSLCAP00010021885	ENSLCAP00010045879	ENSLCAP00010021885	ENSLCAP00010045879	Apolipoprotein Eb.	Apolipoprotein Bb, tandem duplicate 2.	0.746