Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSLCAP00010037926 | irak3 | ENSLCAP00010037926 | ENSLCAP00010038807 | Protein kinase domain-containing protein. | Uncharacterized protein. | 0.881 |
ENSLCAP00010037926 | myd88 | ENSLCAP00010037926 | ENSLCAP00010022073 | Protein kinase domain-containing protein. | Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. | 0.984 |
ENSLCAP00010037926 | sigirr | ENSLCAP00010037926 | ENSLCAP00010022246 | Protein kinase domain-containing protein. | Uncharacterized protein. | 0.550 |
ENSLCAP00010037926 | tollip | ENSLCAP00010037926 | ENSLCAP00010017951 | Protein kinase domain-containing protein. | CUE domain-containing protein. | 0.955 |
ENSLCAP00010037926 | traf6 | ENSLCAP00010037926 | ENSLCAP00010039774 | Protein kinase domain-containing protein. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.994 |
ENSLCAP00010041012 | myd88 | ENSLCAP00010041012 | ENSLCAP00010022073 | Interleukin-1. | Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. | 0.462 |
ENSLCAP00010041012 | sigirr | ENSLCAP00010041012 | ENSLCAP00010022246 | Interleukin-1. | Uncharacterized protein. | 0.704 |
ENSLCAP00010050148 | sigirr | ENSLCAP00010050148 | ENSLCAP00010022246 | RAN binding protein 2. | Uncharacterized protein. | 0.512 |
UNC79 | sigirr | ENSLCAP00010048019 | ENSLCAP00010022246 | Unc-79 homolog, NALCN channel complex subunit. | Uncharacterized protein. | 0.779 |
irak3 | ENSLCAP00010037926 | ENSLCAP00010038807 | ENSLCAP00010037926 | Uncharacterized protein. | Protein kinase domain-containing protein. | 0.881 |
irak3 | myd88 | ENSLCAP00010038807 | ENSLCAP00010022073 | Uncharacterized protein. | Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. | 0.847 |
irak3 | sigirr | ENSLCAP00010038807 | ENSLCAP00010022246 | Uncharacterized protein. | Uncharacterized protein. | 0.562 |
irak3 | tollip | ENSLCAP00010038807 | ENSLCAP00010017951 | Uncharacterized protein. | CUE domain-containing protein. | 0.674 |
irak3 | traf6 | ENSLCAP00010038807 | ENSLCAP00010039774 | Uncharacterized protein. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.878 |
myd88 | ENSLCAP00010037926 | ENSLCAP00010022073 | ENSLCAP00010037926 | Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. | Protein kinase domain-containing protein. | 0.984 |
myd88 | ENSLCAP00010041012 | ENSLCAP00010022073 | ENSLCAP00010041012 | Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. | Interleukin-1. | 0.462 |
myd88 | irak3 | ENSLCAP00010022073 | ENSLCAP00010038807 | Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. | Uncharacterized protein. | 0.847 |
myd88 | rbbp5 | ENSLCAP00010022073 | ENSLCAP00010009369 | Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. | WD_REPEATS_REGION domain-containing protein. | 0.782 |
myd88 | ruvbl1 | ENSLCAP00010022073 | ENSLCAP00010038923 | Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.688 |
myd88 | sigirr | ENSLCAP00010022073 | ENSLCAP00010022246 | Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. | Uncharacterized protein. | 0.688 |
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