gcnt3 protein (Lates calcarifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

gcnt3

Uncharacterized protein. (430 aa)

Predicted Functional Partners:

LOC108881461

0.928

LOC108876489

0.928

c1galt1c1

0.923

LOC108900349

0.692

St3gal2

0.692

ENSLCAP00010019775

0.655

ENSLCAP00010026390

0.655

ENSLCAP00010026463

0.655

ENSLCAP00010026519

0.655

ENSLCAP00010026559

0.655

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLCAP00010019775	LOC108876489	ENSLCAP00010019775	ENSLCAP00010047449	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.846
ENSLCAP00010019775	LOC108881461	ENSLCAP00010019775	ENSLCAP00010038350	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.846
ENSLCAP00010019775	c1galt1c1	ENSLCAP00010019775	ENSLCAP00010054386	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.866
ENSLCAP00010019775	gcnt3	ENSLCAP00010019775	ENSLCAP00010022673	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.655
ENSLCAP00010026390	LOC108876489	ENSLCAP00010026390	ENSLCAP00010047449	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.846
ENSLCAP00010026390	LOC108881461	ENSLCAP00010026390	ENSLCAP00010038350	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.846
ENSLCAP00010026390	c1galt1c1	ENSLCAP00010026390	ENSLCAP00010054386	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.866
ENSLCAP00010026390	gcnt3	ENSLCAP00010026390	ENSLCAP00010022673	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.655
ENSLCAP00010026463	LOC108876489	ENSLCAP00010026463	ENSLCAP00010047449	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.846
ENSLCAP00010026463	LOC108881461	ENSLCAP00010026463	ENSLCAP00010038350	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.846
ENSLCAP00010026463	c1galt1c1	ENSLCAP00010026463	ENSLCAP00010054386	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.866
ENSLCAP00010026463	gcnt3	ENSLCAP00010026463	ENSLCAP00010022673	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.655
ENSLCAP00010026519	LOC108876489	ENSLCAP00010026519	ENSLCAP00010047449	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.846
ENSLCAP00010026519	LOC108881461	ENSLCAP00010026519	ENSLCAP00010038350	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.846
ENSLCAP00010026519	c1galt1c1	ENSLCAP00010026519	ENSLCAP00010054386	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.866
ENSLCAP00010026519	gcnt3	ENSLCAP00010026519	ENSLCAP00010022673	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.655
ENSLCAP00010026559	LOC108876489	ENSLCAP00010026559	ENSLCAP00010047449	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.846
ENSLCAP00010026559	LOC108881461	ENSLCAP00010026559	ENSLCAP00010038350	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.846
ENSLCAP00010026559	c1galt1c1	ENSLCAP00010026559	ENSLCAP00010054386	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.866
ENSLCAP00010026559	gcnt3	ENSLCAP00010026559	ENSLCAP00010022673	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.655