STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108882866G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (353 aa)    
Predicted Functional Partners:
LOC108882475
Aa_trans domain-containing protein.
      
 0.473
Gpr18
G protein-coupled receptor 18.
    
 
0.439
LOC108880230
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 
 
0.408
ENSLCAP00010035600
Uncharacterized protein.
      
 0.403
ENSLCAP00010037329
Uncharacterized protein.
      
 0.403
Gpr183
G protein-coupled receptor 183a; Belongs to the G-protein coupled receptor 1 family.
   
 
0.402
ENSLCAP00010022993
Si:ch211-184m13.4; Belongs to the G-protein coupled receptor 1 family.
   
 
0.402
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.