Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSLCAP00010005551 | ENSLCAP00010047578 | ENSLCAP00010005551 | ENSLCAP00010047578 | Zinc finger protein 143b. | POU domain protein. | 0.557 |
ENSLCAP00010005551 | ENSLCAP00010047866 | ENSLCAP00010005551 | ENSLCAP00010047866 | Zinc finger protein 143b. | PCF11, cleavage and polyadenylation factor subunit. | 0.506 |
ENSLCAP00010005551 | LOC108893232 | ENSLCAP00010005551 | ENSLCAP00010024580 | Zinc finger protein 143b. | POU domain protein. | 0.557 |
ENSLCAP00010005551 | Pou2f2 | ENSLCAP00010005551 | ENSLCAP00010000194 | Zinc finger protein 143b. | POU domain protein. | 0.557 |
ENSLCAP00010005551 | gtf2b | ENSLCAP00010005551 | ENSLCAP00010048978 | Zinc finger protein 143b. | TFIIB-type domain-containing protein. | 0.627 |
ENSLCAP00010005551 | polr3k | ENSLCAP00010005551 | ENSLCAP00010005721 | Zinc finger protein 143b. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.560 |
ENSLCAP00010005551 | sp1 | ENSLCAP00010005551 | ENSLCAP00010036320 | Zinc finger protein 143b. | Uncharacterized protein. | 0.692 |
ENSLCAP00010023432 | ENSLCAP00010047578 | ENSLCAP00010023432 | ENSLCAP00010047578 | E1A binding protein p300 b. | POU domain protein. | 0.592 |
ENSLCAP00010023432 | LOC108893232 | ENSLCAP00010023432 | ENSLCAP00010024580 | E1A binding protein p300 b. | POU domain protein. | 0.592 |
ENSLCAP00010023432 | Pou2f2 | ENSLCAP00010023432 | ENSLCAP00010000194 | E1A binding protein p300 b. | POU domain protein. | 0.592 |
ENSLCAP00010023432 | gtf2b | ENSLCAP00010023432 | ENSLCAP00010048978 | E1A binding protein p300 b. | TFIIB-type domain-containing protein. | 0.753 |
ENSLCAP00010023432 | sp1 | ENSLCAP00010023432 | ENSLCAP00010036320 | E1A binding protein p300 b. | Uncharacterized protein. | 0.980 |
ENSLCAP00010047578 | ENSLCAP00010005551 | ENSLCAP00010047578 | ENSLCAP00010005551 | POU domain protein. | Zinc finger protein 143b. | 0.557 |
ENSLCAP00010047578 | ENSLCAP00010023432 | ENSLCAP00010047578 | ENSLCAP00010023432 | POU domain protein. | E1A binding protein p300 b. | 0.592 |
ENSLCAP00010047578 | ENSLCAP00010047866 | ENSLCAP00010047578 | ENSLCAP00010047866 | POU domain protein. | PCF11, cleavage and polyadenylation factor subunit. | 0.521 |
ENSLCAP00010047578 | ENSLCAP00010051523 | ENSLCAP00010047578 | ENSLCAP00010051523 | POU domain protein. | Uncharacterized protein. | 0.567 |
ENSLCAP00010047578 | LOC108893232 | ENSLCAP00010047578 | ENSLCAP00010024580 | POU domain protein. | POU domain protein. | 0.900 |
ENSLCAP00010047578 | Pou2f2 | ENSLCAP00010047578 | ENSLCAP00010000194 | POU domain protein. | POU domain protein. | 0.901 |
ENSLCAP00010047578 | gtf2b | ENSLCAP00010047578 | ENSLCAP00010048978 | POU domain protein. | TFIIB-type domain-containing protein. | 0.527 |
ENSLCAP00010047578 | polr3k | ENSLCAP00010047578 | ENSLCAP00010005721 | POU domain protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.535 |
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