Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC108885629 | LOC108898939 | ENSLCAP00010047349 | ENSLCAP00010054995 | Plug_translocon domain-containing protein. | Uncharacterized protein. | 0.686 |
LOC108885629 | SSR1 | ENSLCAP00010047349 | ENSLCAP00010024652 | Plug_translocon domain-containing protein. | Signal sequence receptor subunit 1. | 0.748 |
LOC108885629 | Ssr4 | ENSLCAP00010047349 | ENSLCAP00010040887 | Plug_translocon domain-containing protein. | Signal sequence receptor, delta. | 0.824 |
LOC108885629 | ddost | ENSLCAP00010047349 | ENSLCAP00010001704 | Plug_translocon domain-containing protein. | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...] | 0.997 |
LOC108885629 | rpn1 | ENSLCAP00010047349 | ENSLCAP00010048211 | Plug_translocon domain-containing protein. | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] | 0.999 |
LOC108885629 | rpn2 | ENSLCAP00010047349 | ENSLCAP00010019994 | Plug_translocon domain-containing protein. | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] | 0.996 |
LOC108885629 | sec61b | ENSLCAP00010047349 | ENSLCAP00010012168 | Plug_translocon domain-containing protein. | Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. | 0.999 |
LOC108885629 | ssr2 | ENSLCAP00010047349 | ENSLCAP00010017353 | Plug_translocon domain-containing protein. | Translocon-associated protein subunit beta; TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins. | 0.933 |
LOC108885629 | ssr3 | ENSLCAP00010047349 | ENSLCAP00010014127 | Plug_translocon domain-containing protein. | Uncharacterized protein. | 0.927 |
LOC108885629 | stt3a | ENSLCAP00010047349 | ENSLCAP00010034064 | Plug_translocon domain-containing protein. | Uncharacterized protein. | 0.918 |
LOC108898939 | LOC108885629 | ENSLCAP00010054995 | ENSLCAP00010047349 | Uncharacterized protein. | Plug_translocon domain-containing protein. | 0.686 |
LOC108898939 | SSR1 | ENSLCAP00010054995 | ENSLCAP00010024652 | Uncharacterized protein. | Signal sequence receptor subunit 1. | 0.902 |
LOC108898939 | Ssr4 | ENSLCAP00010054995 | ENSLCAP00010040887 | Uncharacterized protein. | Signal sequence receptor, delta. | 0.983 |
LOC108898939 | ddost | ENSLCAP00010054995 | ENSLCAP00010001704 | Uncharacterized protein. | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...] | 0.699 |
LOC108898939 | rpn1 | ENSLCAP00010054995 | ENSLCAP00010048211 | Uncharacterized protein. | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] | 0.776 |
LOC108898939 | rpn2 | ENSLCAP00010054995 | ENSLCAP00010019994 | Uncharacterized protein. | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] | 0.719 |
LOC108898939 | sec61b | ENSLCAP00010054995 | ENSLCAP00010012168 | Uncharacterized protein. | Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. | 0.787 |
LOC108898939 | ssr2 | ENSLCAP00010054995 | ENSLCAP00010017353 | Uncharacterized protein. | Translocon-associated protein subunit beta; TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins. | 0.988 |
LOC108898939 | ssr3 | ENSLCAP00010054995 | ENSLCAP00010014127 | Uncharacterized protein. | Uncharacterized protein. | 0.990 |
LOC108898939 | stt3a | ENSLCAP00010054995 | ENSLCAP00010034064 | Uncharacterized protein. | Uncharacterized protein. | 0.451 |
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