Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Actr5 | chd1 | ENSLCAP00010001667 | ENSLCAP00010027636 | ARP5 actin related protein 5 homolog; Belongs to the actin family. | Uncharacterized protein. | 0.673 |
Actr5 | ino80c | ENSLCAP00010001667 | ENSLCAP00010012790 | ARP5 actin related protein 5 homolog; Belongs to the actin family. | YL1_C domain-containing protein. | 0.998 |
Actr5 | ruvbl1 | ENSLCAP00010001667 | ENSLCAP00010038923 | ARP5 actin related protein 5 homolog; Belongs to the actin family. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.998 |
ENSLCAP00010011538 | ENSLCAP00010059212 | ENSLCAP00010011538 | ENSLCAP00010059212 | Translocase of outer mitochondrial membrane 20. | AT rich interactive domain 4A (RBP1-like). | 0.637 |
ENSLCAP00010011538 | chd1 | ENSLCAP00010011538 | ENSLCAP00010027636 | Translocase of outer mitochondrial membrane 20. | Uncharacterized protein. | 0.688 |
ENSLCAP00010011538 | ruvbl1 | ENSLCAP00010011538 | ENSLCAP00010038923 | Translocase of outer mitochondrial membrane 20. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.692 |
ENSLCAP00010023916 | Supt5h | ENSLCAP00010023916 | ENSLCAP00010050294 | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | Transcription elongation factor SPT5. | 0.983 |
ENSLCAP00010023916 | chd1 | ENSLCAP00010023916 | ENSLCAP00010027636 | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | Uncharacterized protein. | 0.708 |
ENSLCAP00010023916 | polr2c | ENSLCAP00010023916 | ENSLCAP00010017953 | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | RPOLD domain-containing protein. | 0.974 |
ENSLCAP00010023916 | supt16h | ENSLCAP00010023916 | ENSLCAP00010010673 | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | Uncharacterized protein. | 0.999 |
ENSLCAP00010059212 | ENSLCAP00010011538 | ENSLCAP00010059212 | ENSLCAP00010011538 | AT rich interactive domain 4A (RBP1-like). | Translocase of outer mitochondrial membrane 20. | 0.637 |
ENSLCAP00010059212 | chd1 | ENSLCAP00010059212 | ENSLCAP00010027636 | AT rich interactive domain 4A (RBP1-like). | Uncharacterized protein. | 0.688 |
ENSLCAP00010059212 | ruvbl1 | ENSLCAP00010059212 | ENSLCAP00010038923 | AT rich interactive domain 4A (RBP1-like). | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.692 |
Supt5h | ENSLCAP00010023916 | ENSLCAP00010050294 | ENSLCAP00010023916 | Transcription elongation factor SPT5. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.983 |
Supt5h | chd1 | ENSLCAP00010050294 | ENSLCAP00010027636 | Transcription elongation factor SPT5. | Uncharacterized protein. | 0.646 |
Supt5h | polr2c | ENSLCAP00010050294 | ENSLCAP00010017953 | Transcription elongation factor SPT5. | RPOLD domain-containing protein. | 0.997 |
Supt5h | ruvbl1 | ENSLCAP00010050294 | ENSLCAP00010038923 | Transcription elongation factor SPT5. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.571 |
Supt5h | supt16h | ENSLCAP00010050294 | ENSLCAP00010010673 | Transcription elongation factor SPT5. | Uncharacterized protein. | 0.987 |
chd1 | Actr5 | ENSLCAP00010027636 | ENSLCAP00010001667 | Uncharacterized protein. | ARP5 actin related protein 5 homolog; Belongs to the actin family. | 0.673 |
chd1 | ENSLCAP00010011538 | ENSLCAP00010027636 | ENSLCAP00010011538 | Uncharacterized protein. | Translocase of outer mitochondrial membrane 20. | 0.688 |
page 1 of 3