STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLCB11-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. (1244 aa)    
Predicted Functional Partners:
LOC108881412
Uncharacterized protein.
    
 0.961
LOC108878372
Uncharacterized protein.
    
 0.961
LOC108881409
Uncharacterized protein.
    
 0.955
LOC108874116
Uncharacterized protein.
    
 0.954
ENSLCAP00010005935
Guanine nucleotide binding protein (G protein), q polypeptide.
    
 0.954
Itpr2
Inositol 1,4,5-trisphosphate receptor, type 2.
   
 0.920
ENSLCAP00010049689
Inositol 1,4,5-trisphosphate receptor, type 1a.
   
 0.920
ENSLCAP00010004296
Si:ch1073-155h21.1.
     
 0.913
Gprc6a
G protein-coupled receptor, class C, group 6, member A.
     
 0.913
casr
G_PROTEIN_RECEP_F3_4 domain-containing protein.
     
 0.913
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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