STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108883534AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (170 aa)    
Predicted Functional Partners:
ap1g1
AP-1 complex subunit gamma.
    
 0.984
ap1b1
Uncharacterized protein.
    
 0.976
LOC108884184
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.968
LOC108895285
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.968
AP1M2
Adaptor related protein complex 1 subunit mu 2; Belongs to the adaptor complexes medium subunit family.
   
 0.968
ENSLCAP00010038334
Cyclin G associated kinase.
   
 
 0.956
AP1S2
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
  
  
 
0.901
ENSLCAP00010031207
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
  
  
 
0.901
LOC108879721
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
  
  
 
0.901
LOC108883942
AP-1 complex subunit gamma.
    
 0.855
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.