STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gabrb2Gamma-aminobutyric acid (GABA) A receptor, beta 2; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (596 aa)    
Predicted Functional Partners:
gabrg2
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.713
gabrg1
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
0.702
GABRG3
Gamma-aminobutyric acid type A receptor gamma3 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
0.702
GABRG3-2
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
0.702
ENSLCAP00010029088
Gamma-aminobutyric acid (GABA) A receptor, alpha 5; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.657
LOC108891881
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.652
LOC108893896
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.650
LOC108893429
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.647
LOC108878814
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.588
ENSLCAP00010028352
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.586
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.