STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCAP00010033524TPX2, microtubule-associated, homolog (Xenopus laevis). (644 aa)    
Predicted Functional Partners:
LOC108884115
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.913
ENSLCAP00010048462
Aurora kinase B; Belongs to the protein kinase superfamily.
   
 0.913
LOC108880779
Uncharacterized protein.
   
 0.870
ENSLCAP00010012388
Discs, large (Drosophila) homolog-associated protein 5.
   
  
 0.866
ube2c
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
  
 0.851
nusap1
Uncharacterized protein.
   
 
 0.850
LOC108893959
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.835
ttk
Protein kinase domain-containing protein.
   
  
 0.826
bub1
Uncharacterized protein.
   
  
 0.826
melk
Non-specific serine/threonine protein kinase.
   
 
 0.822
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.