LOC108883553 protein (Lates calcarifer) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

LOC108883553

Uncharacterized protein. (573 aa)

Predicted Functional Partners:

traf6

0.990

LOC108884442

0.986

tmed2

0.967

ripk1

0.963

tmed10

0.962

irf7

0.961

tlr3

0.956

LOC108890753

0.948

ENSLCAP00010024823

0.948

irak4

0.941

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLCAP00010024823	LOC108883553	ENSLCAP00010024823	ENSLCAP00010033885	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.948
ENSLCAP00010024823	LOC108890753	ENSLCAP00010024823	ENSLCAP00010009740	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.904
ENSLCAP00010024823	ripk1	ENSLCAP00010024823	ENSLCAP00010020400	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.997
ENSLCAP00010024823	traf6	ENSLCAP00010024823	ENSLCAP00010039774	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.666
LOC108883553	ENSLCAP00010024823	ENSLCAP00010033885	ENSLCAP00010024823	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.948
LOC108883553	LOC108884442	ENSLCAP00010033885	ENSLCAP00010058934	Uncharacterized protein.	IRF tryptophan pentad repeat domain-containing protein.	0.986
LOC108883553	LOC108890753	ENSLCAP00010033885	ENSLCAP00010009740	Uncharacterized protein.	Protein kinase domain-containing protein.	0.948
LOC108883553	irak4	ENSLCAP00010033885	ENSLCAP00010051267	Uncharacterized protein.	Protein kinase domain-containing protein.	0.941
LOC108883553	irf7	ENSLCAP00010033885	ENSLCAP00010037153	Uncharacterized protein.	IRF tryptophan pentad repeat domain-containing protein.	0.961
LOC108883553	ripk1	ENSLCAP00010033885	ENSLCAP00010020400	Uncharacterized protein.	Uncharacterized protein.	0.963
LOC108883553	tlr3	ENSLCAP00010033885	ENSLCAP00010042064	Uncharacterized protein.	TIR domain-containing protein; Belongs to the Toll-like receptor family.	0.956
LOC108883553	tmed10	ENSLCAP00010033885	ENSLCAP00010017815	Uncharacterized protein.	GOLD domain-containing protein.	0.962
LOC108883553	tmed2	ENSLCAP00010033885	ENSLCAP00010023316	Uncharacterized protein.	GOLD domain-containing protein.	0.967
LOC108883553	traf6	ENSLCAP00010033885	ENSLCAP00010039774	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.990
LOC108884442	LOC108883553	ENSLCAP00010058934	ENSLCAP00010033885	IRF tryptophan pentad repeat domain-containing protein.	Uncharacterized protein.	0.986
LOC108884442	irak4	ENSLCAP00010058934	ENSLCAP00010051267	IRF tryptophan pentad repeat domain-containing protein.	Protein kinase domain-containing protein.	0.547
LOC108884442	irf7	ENSLCAP00010058934	ENSLCAP00010037153	IRF tryptophan pentad repeat domain-containing protein.	IRF tryptophan pentad repeat domain-containing protein.	0.986
LOC108884442	ripk1	ENSLCAP00010058934	ENSLCAP00010020400	IRF tryptophan pentad repeat domain-containing protein.	Uncharacterized protein.	0.500
LOC108884442	tlr3	ENSLCAP00010058934	ENSLCAP00010042064	IRF tryptophan pentad repeat domain-containing protein.	TIR domain-containing protein; Belongs to the Toll-like receptor family.	0.785
LOC108884442	traf6	ENSLCAP00010058934	ENSLCAP00010039774	IRF tryptophan pentad repeat domain-containing protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.792