STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCAP00010036341Protein kinase domain-containing protein. (188 aa)    
Predicted Functional Partners:
hspa5
Uncharacterized protein; Belongs to the heat shock protein 70 family.
    
 0.880
ankrd45
ANK_REP_REGION domain-containing protein.
    
 0.765
ENSLCAP00010004550
ATP-binding cassette, sub-family E (OABP), member 1.
   
 0.652
Sec63
SEC63 homolog, protein translocation regulator.
    
 
 0.543
ENSLCAP00010038150
Intersectin 2a.
   
 0.467
ENSLCAP00010057040
Intersectin 2b.
   
 0.467
Mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.460
ENSLCAP00010032062
Uncharacterized protein.
   
 0.453
Xbp1
BZIP domain-containing protein.
    
 0.447
LOC108872668
Uncharacterized protein.
    
 
 0.411
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.