STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCAP00010036864Protein kinase domain-containing protein. (318 aa)    
Predicted Functional Partners:
LOC108890753
Protein kinase domain-containing protein.
   
 0.888
ENSLCAP00010024823
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.888
ripk1
Uncharacterized protein.
    
 0.748
LOC108880505
Uncharacterized protein.
    
 0.589
tradd
Death domain-containing protein.
   
 0.551
Mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.538
ENSLCAP00010038150
Intersectin 2a.
   
 0.467
ENSLCAP00010057040
Intersectin 2b.
   
 0.467
ENSLCAP00010032062
Uncharacterized protein.
   
 0.457
ENSLCAP00010008403
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.456
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.