STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsf5HSF_DOMAIN domain-containing protein. (450 aa)    
Predicted Functional Partners:
dnajb13
J domain-containing protein.
   
 0.713
trap1
Uncharacterized protein.
    
 0.609
hsp90ab1
HATPase_c domain-containing protein.
    
 0.609
ENSLCAP00010044201
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
    
 0.609
ENSLCAP00010048625
TSC complex subunit 1b.
    
 0.609
ENSLCAP00010051953
Uncharacterized protein.
    
 0.609
hsp90b1
HATPase_c domain-containing protein.
    
 0.602
ENSLCAP00010050457
Immunoglobulin-like domain containing receptor 2.
      
 0.553
ENSLCAP00010010543
Phosphatase and actin regulator 4a.
   
  
 0.544
LOC108903091
TGc domain-containing protein.
      
 0.539
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.