Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSLCAP00010050805 | LOC108896806 | ENSLCAP00010050805 | ENSLCAP00010038232 | Nuclear receptor corepressor 2. | Uncharacterized protein. | 0.591 |
ENSLCAP00010050805 | med1 | ENSLCAP00010050805 | ENSLCAP00010002181 | Nuclear receptor corepressor 2. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.660 |
LOC108885305 | LOC108896806 | ENSLCAP00010010292 | ENSLCAP00010038232 | Uncharacterized protein. | Uncharacterized protein. | 0.572 |
LOC108896806 | ENSLCAP00010050805 | ENSLCAP00010038232 | ENSLCAP00010050805 | Uncharacterized protein. | Nuclear receptor corepressor 2. | 0.591 |
LOC108896806 | LOC108885305 | ENSLCAP00010038232 | ENSLCAP00010010292 | Uncharacterized protein. | Uncharacterized protein. | 0.572 |
LOC108896806 | med1 | ENSLCAP00010038232 | ENSLCAP00010002181 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.537 |
LOC108896806 | ncor1 | ENSLCAP00010038232 | ENSLCAP00010041303 | Uncharacterized protein. | Uncharacterized protein. | 0.591 |
LOC108896806 | nrip1 | ENSLCAP00010038232 | ENSLCAP00010031800 | Uncharacterized protein. | Uncharacterized protein. | 0.583 |
LOC108896806 | ppargc1a | ENSLCAP00010038232 | ENSLCAP00010036265 | Uncharacterized protein. | RRM domain-containing protein. | 0.786 |
med1 | ENSLCAP00010050805 | ENSLCAP00010002181 | ENSLCAP00010050805 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor corepressor 2. | 0.660 |
med1 | LOC108896806 | ENSLCAP00010002181 | ENSLCAP00010038232 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.537 |
med1 | ncor1 | ENSLCAP00010002181 | ENSLCAP00010041303 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.660 |
med1 | nrip1 | ENSLCAP00010002181 | ENSLCAP00010031800 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.401 |
med1 | ppargc1a | ENSLCAP00010002181 | ENSLCAP00010036265 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | RRM domain-containing protein. | 0.437 |
ncor1 | LOC108896806 | ENSLCAP00010041303 | ENSLCAP00010038232 | Uncharacterized protein. | Uncharacterized protein. | 0.591 |
ncor1 | med1 | ENSLCAP00010041303 | ENSLCAP00010002181 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.660 |
nrip1 | LOC108896806 | ENSLCAP00010031800 | ENSLCAP00010038232 | Uncharacterized protein. | Uncharacterized protein. | 0.583 |
nrip1 | med1 | ENSLCAP00010031800 | ENSLCAP00010002181 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.401 |
nrip1 | ppargc1a | ENSLCAP00010031800 | ENSLCAP00010036265 | Uncharacterized protein. | RRM domain-containing protein. | 0.795 |
ppargc1a | LOC108896806 | ENSLCAP00010036265 | ENSLCAP00010038232 | RRM domain-containing protein. | Uncharacterized protein. | 0.786 |
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