STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCAP00010040848Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (461 aa)    
Predicted Functional Partners:
LOC108889006
Uncharacterized protein.
   
 0.809
LOC108895223
Uncharacterized protein.
   
 0.809
LOC108895335
Uncharacterized protein.
   
 0.809
ENSLCAP00010032556
Uncharacterized protein.
   
 0.809
LOC108878935
Uncharacterized protein.
   
 0.808
LOC108883481
Uncharacterized protein.
   
 0.808
RAB41
Uncharacterized protein.
   
 0.808
rab6a
Uncharacterized protein.
   
 0.808
Armc5
BTB domain-containing protein.
    
 0.776
RAB9A
Uncharacterized protein.
    
 0.776
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
Server load: low (28%) [HD]