STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cunh1orf198DUF4706 domain-containing protein. (350 aa)    
Predicted Functional Partners:
LOC108878002
Uncharacterized protein.
   
 0.991
LOC108898154
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 0.981
LOC108879875
Uncharacterized protein.
   
 0.980
LOC108882929
Uncharacterized protein.
   
 0.980
LOC108884887
Uncharacterized protein.
   
 0.970
ENSLCAP00010007836
Cytochrome c oxidase subunit 4I1.
   
 0.970
LOC108901470
COX6C domain-containing protein.
   
 0.967
LOC108880581
Uncharacterized protein.
   
 0.965
ENSLCAP00010044947
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.965
LOC108877838
Rieske domain-containing protein.
   
 0.958
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.