Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ankrd27 | LOC108902018 | ENSLCAP00010036845 | ENSLCAP00010042415 | Ankyrin repeat domain 27 (VPS9 domain). | Uncharacterized protein. | 0.497 |
ENSLCAP00010036848 | LOC108902018 | ENSLCAP00010036848 | ENSLCAP00010042415 | ANK_REP_REGION domain-containing protein. | Uncharacterized protein. | 0.497 |
ENSLCAP00010038334 | LOC108902018 | ENSLCAP00010038334 | ENSLCAP00010042415 | Cyclin G associated kinase. | Uncharacterized protein. | 0.731 |
ENSLCAP00010038334 | dnajc6 | ENSLCAP00010038334 | ENSLCAP00010020458 | Cyclin G associated kinase. | Uncharacterized protein. | 0.982 |
ENSLCAP00010038656 | Hps4 | ENSLCAP00010038656 | ENSLCAP00010044963 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Hermansky-Pudlak syndrome 4. | 0.409 |
ENSLCAP00010038656 | LOC108902018 | ENSLCAP00010038656 | ENSLCAP00010042415 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Uncharacterized protein. | 0.441 |
ENSLCAP00010038656 | Ptar1 | ENSLCAP00010038656 | ENSLCAP00010051324 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Protein prenyltransferase alpha subunit repeat containing 1. | 0.559 |
ENSLCAP00010038656 | Rabggta | ENSLCAP00010038656 | ENSLCAP00010013291 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Rab geranylgeranyltransferase subunit alpha. | 0.559 |
Hps1 | Hps4 | ENSLCAP00010008516 | ENSLCAP00010044963 | Hermansky-Pudlak syndrome 1. | Hermansky-Pudlak syndrome 4. | 0.975 |
Hps1 | LOC108902018 | ENSLCAP00010008516 | ENSLCAP00010042415 | Hermansky-Pudlak syndrome 1. | Uncharacterized protein. | 0.503 |
Hps4 | ENSLCAP00010038656 | ENSLCAP00010044963 | ENSLCAP00010038656 | Hermansky-Pudlak syndrome 4. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.409 |
Hps4 | Hps1 | ENSLCAP00010044963 | ENSLCAP00010008516 | Hermansky-Pudlak syndrome 4. | Hermansky-Pudlak syndrome 1. | 0.975 |
Hps4 | LOC108890966 | ENSLCAP00010044963 | ENSLCAP00010023197 | Hermansky-Pudlak syndrome 4. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.409 |
Hps4 | LOC108902018 | ENSLCAP00010044963 | ENSLCAP00010042415 | Hermansky-Pudlak syndrome 4. | Uncharacterized protein. | 0.463 |
LOC108890966 | Hps4 | ENSLCAP00010023197 | ENSLCAP00010044963 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Hermansky-Pudlak syndrome 4. | 0.409 |
LOC108890966 | LOC108902018 | ENSLCAP00010023197 | ENSLCAP00010042415 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Uncharacterized protein. | 0.441 |
LOC108890966 | Ptar1 | ENSLCAP00010023197 | ENSLCAP00010051324 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Protein prenyltransferase alpha subunit repeat containing 1. | 0.559 |
LOC108890966 | Rabggta | ENSLCAP00010023197 | ENSLCAP00010013291 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Rab geranylgeranyltransferase subunit alpha. | 0.559 |
LOC108902018 | Ankrd27 | ENSLCAP00010042415 | ENSLCAP00010036845 | Uncharacterized protein. | Ankyrin repeat domain 27 (VPS9 domain). | 0.497 |
LOC108902018 | ENSLCAP00010036848 | ENSLCAP00010042415 | ENSLCAP00010036848 | Uncharacterized protein. | ANK_REP_REGION domain-containing protein. | 0.497 |
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