STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCAP00010043125Envoplakin a. (1926 aa)    
Predicted Functional Partners:
ppl
SH3 domain-containing protein.
  
 
0.759
ENSLCAP00010051640
Kazrin, periplakin interacting protein b.
    
 0.581
KAZN
Uncharacterized protein.
    
 0.581
dsc2
Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 0.580
acox1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
    
 
 0.570
ENSLCAP00010038150
Intersectin 2a.
    
 0.525
ENSLCAP00010057040
Intersectin 2b.
    
 0.525
ENSLCAP00010028147
Spectrin alpha, non-erythrocytic 1.
   
 0.508
tada3
Uncharacterized protein.
    
 0.489
supt3h
Uncharacterized protein.
    
 0.476
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.