LOC108888490 protein (Lates calcarifer) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

LOC108888490

Uncharacterized protein. (236 aa)

Predicted Functional Partners:

eed

0.950

LOC108888586

0.901

ENSLCAP00010053993

0.901

dnmt1

0.840

ENSLCAP00010017650

0.838

ENSLCAP00010020695

0.838

LOC108900385

0.838

AEBP2

0.825

ENSLCAP00010042258

0.825

Jarid2

0.820

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AEBP2	ENSLCAP00010017650	ENSLCAP00010014977	ENSLCAP00010017650	Uncharacterized protein.	Retinoblastoma binding protein 4, like.	0.819
AEBP2	ENSLCAP00010020695	ENSLCAP00010014977	ENSLCAP00010020695	Uncharacterized protein.	Retinoblastoma binding protein 4.	0.819
AEBP2	ENSLCAP00010053993	ENSLCAP00010014977	ENSLCAP00010053993	Uncharacterized protein.	SUZ12, polycomb repressive complex 2 subunit b.	0.913
AEBP2	Jarid2	ENSLCAP00010014977	ENSLCAP00010030105	Uncharacterized protein.	Jumonji, AT rich interactive domain 2b.	0.930
AEBP2	LOC108888490	ENSLCAP00010014977	ENSLCAP00010043772	Uncharacterized protein.	Uncharacterized protein.	0.825
AEBP2	LOC108888586	ENSLCAP00010014977	ENSLCAP00010029325	Uncharacterized protein.	VEFS-Box domain-containing protein.	0.913
AEBP2	LOC108900385	ENSLCAP00010014977	ENSLCAP00010053561	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.819
AEBP2	dnmt1	ENSLCAP00010014977	ENSLCAP00010056006	Uncharacterized protein.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.570
AEBP2	eed	ENSLCAP00010014977	ENSLCAP00010022305	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.961
ENSLCAP00010017650	AEBP2	ENSLCAP00010017650	ENSLCAP00010014977	Retinoblastoma binding protein 4, like.	Uncharacterized protein.	0.819
ENSLCAP00010017650	ENSLCAP00010020695	ENSLCAP00010017650	ENSLCAP00010020695	Retinoblastoma binding protein 4, like.	Retinoblastoma binding protein 4.	0.900
ENSLCAP00010017650	ENSLCAP00010042258	ENSLCAP00010017650	ENSLCAP00010042258	Retinoblastoma binding protein 4, like.	AE binding protein 2.	0.820
ENSLCAP00010017650	ENSLCAP00010053993	ENSLCAP00010017650	ENSLCAP00010053993	Retinoblastoma binding protein 4, like.	SUZ12, polycomb repressive complex 2 subunit b.	0.895
ENSLCAP00010017650	Jarid2	ENSLCAP00010017650	ENSLCAP00010030105	Retinoblastoma binding protein 4, like.	Jumonji, AT rich interactive domain 2b.	0.817
ENSLCAP00010017650	LOC108888490	ENSLCAP00010017650	ENSLCAP00010043772	Retinoblastoma binding protein 4, like.	Uncharacterized protein.	0.838
ENSLCAP00010017650	LOC108888586	ENSLCAP00010017650	ENSLCAP00010029325	Retinoblastoma binding protein 4, like.	VEFS-Box domain-containing protein.	0.895
ENSLCAP00010017650	LOC108900385	ENSLCAP00010017650	ENSLCAP00010053561	Retinoblastoma binding protein 4, like.	WD_REPEATS_REGION domain-containing protein.	0.900
ENSLCAP00010017650	dnmt1	ENSLCAP00010017650	ENSLCAP00010056006	Retinoblastoma binding protein 4, like.	DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.616
ENSLCAP00010017650	eed	ENSLCAP00010017650	ENSLCAP00010022305	Retinoblastoma binding protein 4, like.	WD_REPEATS_REGION domain-containing protein.	0.947
ENSLCAP00010020695	AEBP2	ENSLCAP00010020695	ENSLCAP00010014977	Retinoblastoma binding protein 4.	Uncharacterized protein.	0.819