LOC108872618 protein (Lates calcarifer) - STRING interaction network

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

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Score

LOC108872618

Uncharacterized protein. (407 aa)

Predicted Functional Partners:

arid2

0.616

SMARCE1

0.603

LOC108898497

0.603

SMARCB1

0.588

LOC108900728

0.588

actl6a

0.566

LOC108898039

0.511

ENSLCAP00010039137

0.511

ENSLCAP00010020790

0.503

ENSLCAP00010057229

0.503

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLCAP00010020790	ENSLCAP00010039137	ENSLCAP00010020790	ENSLCAP00010039137	Polybromo 1, like.	AT rich interactive domain 1B (SWI1-like).	0.535
ENSLCAP00010020790	LOC108872618	ENSLCAP00010020790	ENSLCAP00010045709	Polybromo 1, like.	Uncharacterized protein.	0.503
ENSLCAP00010020790	LOC108898039	ENSLCAP00010020790	ENSLCAP00010008135	Polybromo 1, like.	ARID domain-containing protein.	0.535
ENSLCAP00010020790	LOC108898497	ENSLCAP00010020790	ENSLCAP00010029772	Polybromo 1, like.	HMG box domain-containing protein.	0.857
ENSLCAP00010020790	LOC108900728	ENSLCAP00010020790	ENSLCAP00010028592	Polybromo 1, like.	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.	0.933
ENSLCAP00010020790	SMARCB1	ENSLCAP00010020790	ENSLCAP00010014819	Polybromo 1, like.	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.	0.933
ENSLCAP00010020790	SMARCE1	ENSLCAP00010020790	ENSLCAP00010020602	Polybromo 1, like.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.857
ENSLCAP00010020790	actl6a	ENSLCAP00010020790	ENSLCAP00010049491	Polybromo 1, like.	Uncharacterized protein; Belongs to the actin family.	0.935
ENSLCAP00010020790	arid2	ENSLCAP00010020790	ENSLCAP00010056393	Polybromo 1, like.	Uncharacterized protein.	0.970
ENSLCAP00010039137	ENSLCAP00010020790	ENSLCAP00010039137	ENSLCAP00010020790	AT rich interactive domain 1B (SWI1-like).	Polybromo 1, like.	0.535
ENSLCAP00010039137	ENSLCAP00010057229	ENSLCAP00010039137	ENSLCAP00010057229	AT rich interactive domain 1B (SWI1-like).	Polybromo 1.	0.546
ENSLCAP00010039137	LOC108872618	ENSLCAP00010039137	ENSLCAP00010045709	AT rich interactive domain 1B (SWI1-like).	Uncharacterized protein.	0.511
ENSLCAP00010039137	LOC108898497	ENSLCAP00010039137	ENSLCAP00010029772	AT rich interactive domain 1B (SWI1-like).	HMG box domain-containing protein.	0.808
ENSLCAP00010039137	LOC108900728	ENSLCAP00010039137	ENSLCAP00010028592	AT rich interactive domain 1B (SWI1-like).	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.	0.830
ENSLCAP00010039137	SMARCB1	ENSLCAP00010039137	ENSLCAP00010014819	AT rich interactive domain 1B (SWI1-like).	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.	0.830
ENSLCAP00010039137	SMARCE1	ENSLCAP00010039137	ENSLCAP00010020602	AT rich interactive domain 1B (SWI1-like).	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.808
ENSLCAP00010039137	actl6a	ENSLCAP00010039137	ENSLCAP00010049491	AT rich interactive domain 1B (SWI1-like).	Uncharacterized protein; Belongs to the actin family.	0.690
ENSLCAP00010039137	arid2	ENSLCAP00010039137	ENSLCAP00010056393	AT rich interactive domain 1B (SWI1-like).	Uncharacterized protein.	0.476
ENSLCAP00010057229	ENSLCAP00010039137	ENSLCAP00010057229	ENSLCAP00010039137	Polybromo 1.	AT rich interactive domain 1B (SWI1-like).	0.546
ENSLCAP00010057229	LOC108872618	ENSLCAP00010057229	ENSLCAP00010045709	Polybromo 1.	Uncharacterized protein.	0.503