STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCAP00010048403Phorbol-ester/DAG-type domain-containing protein. (215 aa)    
Predicted Functional Partners:
ENSLCAP00010048398
Non-specific serine/threonine protein kinase.
 
      0.886
Pdpk1
3-phosphoinositide dependent protein kinase 1b.
 
  
 0.739
Card11
Guanylate kinase-like domain-containing protein.
   
 0.696
ENSLCAP00010020544
CARD domain-containing protein.
   
 0.676
Prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
 
  
0.571
sgk2
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
 
  
 0.567
ENSLCAP00010008224
Uncharacterized protein.
    
 0.551
LOC108874872
ELAV-like protein; Belongs to the RRM elav family.
    
 0.551
LOC108874011
ELAV-like protein; Belongs to the RRM elav family.
    
 0.551
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.543
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.