STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108884223Uncharacterized protein. (184 aa)    
Predicted Functional Partners:
Mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.982
Rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.976
mlst8
WD_REPEATS_REGION domain-containing protein.
    
 0.969
akt1s1
Uncharacterized protein.
    
 0.954
LOC108879584
Rab-GAP TBC domain-containing protein.
     
 0.925
bnip3
Uncharacterized protein.
    
 0.922
ENSLCAP00010005799
Uncharacterized protein.
    
 0.921
ENSLCAP00010041424
Si:dkeyp-97e7.9.
    
 0.918
LOC108881470
Uncharacterized protein.
  
  
 
0.901
LOC108891448
Uncharacterized protein.
  
  
 
0.900
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.