STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gpr161Si:ch211-237c6.4; Belongs to the G-protein coupled receptor 1 family. (522 aa)    
Predicted Functional Partners:
LOC108877244
Arrestin_C domain-containing protein.
   
 0.925
LOC108895236
Arrestin_C domain-containing protein.
   
 0.925
ENSLCAP00010026636
Arrestin_C domain-containing protein.
    
  0.913
IFT122
Intraflagellar transport 122.
     
 0.744
Ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
     
 0.713
Ttc21b
Tetratricopeptide repeat domain 21B.
     
 0.706
LOC108883401
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.648
ENSLCAP00010025745
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.
    
 0.648
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.648
LOC108902709
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.648
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.