STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCAP00010053711PhoLip_ATPase_N domain-containing protein. (410 aa)    
Predicted Functional Partners:
ENSLCAP00010053687
PhoLip_ATPase_C domain-containing protein.
 
     0.922
ENSLCAP00010017753
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
 
      0.899
pln
Cardiac phospholamban; Reversibly inhibits the activity of ATP2A2 in cardiac sarcoplasmic reticulum by decreasing the apparent affinity of the ATPase for Ca(2+). Modulates the contractility of the heart muscle in response to physiological stimuli via its effects on ATP2A2. Modulates calcium re-uptake during muscle relaxation and plays an important role in calcium homeostasis in the heart muscle. The degree of ATP2A2 inhibition depends on the oligomeric state of PLN.
    
 0.525
LOC108901231
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.495
LOC108898010
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.495
LOC108874889
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.495
LOC108882256
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.495
ENSLCAP00010035477
FXYD domain-containing ion transport regulator; Belongs to the FXYD family.
    
  0.420
ENSLCAP00010033038
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
0.417
Ccdc103
Dynein_attach_N domain-containing protein.
    
 0.417
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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