STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cenpmUncharacterized protein. (184 aa)    
Predicted Functional Partners:
cenpn
Uncharacterized protein.
   
 0.989
cenpk
Uncharacterized protein.
  
 0.988
cenpi
Uncharacterized protein.
   
 0.988
Cenpq
Uncharacterized protein.
    
 0.982
cenpp
Uncharacterized protein.
   
 0.971
cenpw
Uncharacterized protein.
   
 0.967
ENSLCAP00010057290
Centromere protein X.
    
 0.931
LOC108876370
Somatostatin domain-containing protein.
   
 0.891
ENSLCAP00010012158
Uncharacterized protein.
   
 0.891
casp7
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.803
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.