STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108897725Uncharacterized protein; Belongs to the cytochrome P450 family. (521 aa)    
Predicted Functional Partners:
Ephx1
Epoxide hydrolase; Biotransformation enzyme that catalyzes the hydrolysis of arene and aliphatic epoxides to less reactive and more water soluble dihydrodiols by the trans addition of water. Belongs to the peptidase S33 family.
  
 0.958
ENSLCAP00010014550
Cytochrome P450, family 3, subfamily A, polypeptide 65.
  
0.952
LOC108877940
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
0.952
LOC108887913
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
0.942
CYP19A1
Cytochrome P450 family 19 subfamily A member 1; Belongs to the cytochrome P450 family.
  
0.942
LOC108902785
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
0.939
LOC108896681
Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family.
  
 
0.931
LOC108876786
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
0.931
LOC108886282
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
 
0.929
LOC108883895
UDPGT domain-containing protein; Belongs to the UDP-glycosyltransferase family.
   
 0.927
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.