Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSLCAP00010001908 | ENSLCAP00010023432 | ENSLCAP00010001908 | ENSLCAP00010023432 | CREB binding protein b. | E1A binding protein p300 b. | 0.976 |
ENSLCAP00010001908 | JMY | ENSLCAP00010001908 | ENSLCAP00010060429 | CREB binding protein b. | WH2 domain-containing protein. | 0.637 |
ENSLCAP00010001908 | LOC108879980 | ENSLCAP00010001908 | ENSLCAP00010016052 | CREB binding protein b. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.958 |
ENSLCAP00010001908 | Ttc5 | ENSLCAP00010001908 | ENSLCAP00010013980 | CREB binding protein b. | Tetratricopeptide repeat domain 5. | 0.726 |
ENSLCAP00010001908 | prmt5 | ENSLCAP00010001908 | ENSLCAP00010015555 | CREB binding protein b. | Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. | 0.483 |
ENSLCAP00010011538 | ENSLCAP00010059212 | ENSLCAP00010011538 | ENSLCAP00010059212 | Translocase of outer mitochondrial membrane 20. | AT rich interactive domain 4A (RBP1-like). | 0.637 |
ENSLCAP00010011538 | JMY | ENSLCAP00010011538 | ENSLCAP00010060429 | Translocase of outer mitochondrial membrane 20. | WH2 domain-containing protein. | 0.415 |
ENSLCAP00010023432 | ENSLCAP00010001908 | ENSLCAP00010023432 | ENSLCAP00010001908 | E1A binding protein p300 b. | CREB binding protein b. | 0.976 |
ENSLCAP00010023432 | ENSLCAP00010024216 | ENSLCAP00010023432 | ENSLCAP00010024216 | E1A binding protein p300 b. | CREB binding protein a. | 0.976 |
ENSLCAP00010023432 | JMY | ENSLCAP00010023432 | ENSLCAP00010060429 | E1A binding protein p300 b. | WH2 domain-containing protein. | 0.824 |
ENSLCAP00010023432 | LOC108879980 | ENSLCAP00010023432 | ENSLCAP00010016052 | E1A binding protein p300 b. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.996 |
ENSLCAP00010023432 | Ttc5 | ENSLCAP00010023432 | ENSLCAP00010013980 | E1A binding protein p300 b. | Tetratricopeptide repeat domain 5. | 0.889 |
ENSLCAP00010023432 | prmt5 | ENSLCAP00010023432 | ENSLCAP00010015555 | E1A binding protein p300 b. | Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. | 0.627 |
ENSLCAP00010024216 | ENSLCAP00010023432 | ENSLCAP00010024216 | ENSLCAP00010023432 | CREB binding protein a. | E1A binding protein p300 b. | 0.976 |
ENSLCAP00010024216 | JMY | ENSLCAP00010024216 | ENSLCAP00010060429 | CREB binding protein a. | WH2 domain-containing protein. | 0.637 |
ENSLCAP00010024216 | LOC108879980 | ENSLCAP00010024216 | ENSLCAP00010016052 | CREB binding protein a. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.958 |
ENSLCAP00010024216 | Ttc5 | ENSLCAP00010024216 | ENSLCAP00010013980 | CREB binding protein a. | Tetratricopeptide repeat domain 5. | 0.726 |
ENSLCAP00010024216 | prmt5 | ENSLCAP00010024216 | ENSLCAP00010015555 | CREB binding protein a. | Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. | 0.483 |
ENSLCAP00010032062 | JMY | ENSLCAP00010032062 | ENSLCAP00010060429 | Uncharacterized protein. | WH2 domain-containing protein. | 0.472 |
ENSLCAP00010059212 | ENSLCAP00010011538 | ENSLCAP00010059212 | ENSLCAP00010011538 | AT rich interactive domain 4A (RBP1-like). | Translocase of outer mitochondrial membrane 20. | 0.637 |
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